################################################################################ ############ Matrix comparison V1.0 ############ Input files: ## Motif file (e.g. MEME): meme_text_fickett_data_original_anr_15mtfs_8-12_6minsites_revcomp.txt ## Database file: JASPAR_samples.matrices ## Level of conservation: 50% ################################################################################ MOTIF_1 11 MA0052 MEF2 (10) 0.6792 [ 1 -> 10] - [ 2 -> 11] MA0059 Myc-Max (11) 4.6560 [ 1 -> 6] - [ 6 -> 11] MA0050 Irf-1 (12) 2.5294 [ 6 -> 11] - [ 1 -> 6] MA0060 NF-Y (16) 2.6511 [ 6 -> 11] - [ 1 -> 6] MA0051 Irf-2 (18) 2.0162 [ 1 -> 7] - [12 -> 18] MA0056 MZF_1-4 ( 6) 6.1059 [ 1 -> 6] - [ 1 -> 6] MOTIF_10 12 MA0057 MZF_5-13 (10) 2.2432 [ 5 -> 10] - [ 1 -> 6] MA0059 Myc-Max (11) 3.4703 [ 1 -> 6] - [ 7 -> 12] MA0050 Irf-1 (12) 5.3868 [ 1 -> 7] - [ 6 -> 12] MA0060 NF-Y (16) 2.7636 [ 6 -> 12] - [ 1 -> 7] MA0051 Irf-2 (18) 3.9427 [ 1 -> 6] - [13 -> 18] MA0056 MZF_1-4 ( 6) 3.3348 [ 1 -> 6] - [ 7 -> 12] MOTIF_11 11 MA0058 Max (10) 4.6092 [ 2 -> 10] - [ 1 -> 9] MA0059 Myc-Max (11) 5.6440 [ 1 -> 11] - [ 1 -> 11] MA0055 Myf (12) 3.2458 [ 5 -> 11] - [ 1 -> 7] MA0060 NF-Y (16) 2.8707 [ 6 -> 11] - [ 1 -> 6] MA0051 Irf-2 (18) 3.4897 [ 1 -> 8] - [11 -> 18] MA0056 MZF_1-4 ( 6) 4.0881 [ 1 -> 6] - [ 4 -> 9] MOTIF_12 8 MA0057 MZF_5-13 (10) 5.5480 [ 3 -> 8] - [ 1 -> 6] MA0059 Myc-Max (11) 7.5158 [ 1 -> 8] - [ 3 -> 10] MA0055 Myf (12) 4.7559 [ 3 -> 8] - [ 1 -> 6] MA0060 NF-Y (16) 2.6538 [ 1 -> 7] - [10 -> 16] MA0051 Irf-2 (18) 5.3267 [ 1 -> 6] - [13 -> 18] MA0056 MZF_1-4 ( 6) 3.2342 [ 1 -> 6] - [ 3 -> 8] MOTIF_13 12 MA0057 MZF_5-13 (10) 3.0940 [ 1 -> 10] - [ 3 -> 12] MA0059 Myc-Max (11) 4.2808 [ 1 -> 7] - [ 6 -> 12] MA0055 Myf (12) 3.0921 [ 1 -> 7] - [ 6 -> 12] MA0060 NF-Y (16) 3.3352 [ 1 -> 7] - [10 -> 16] MA0051 Irf-2 (18) 2.8754 [ 1 -> 6] - [13 -> 18] MA0056 MZF_1-4 ( 6) 1.7513 [ 1 -> 6] - [ 5 -> 10] MOTIF_14 11 MA0057 MZF_5-13 (10) 2.8791 [ 3 -> 10] - [ 1 -> 8] MA0059 Myc-Max (11) 5.5457 [ 1 -> 7] - [ 5 -> 11] MA0055 Myf (12) 5.4900 [ 5 -> 11] - [ 1 -> 7] MA0060 NF-Y (16) 2.5157 [ 4 -> 11] - [ 1 -> 8] MA0051 Irf-2 (18) 3.4813 [ 1 -> 6] - [13 -> 18] MA0056 MZF_1-4 ( 6) 2.9215 [ 1 -> 6] - [ 4 -> 9] MOTIF_15 8 MA0057 MZF_5-13 (10) 4.8985 [ 2 -> 8] - [ 1 -> 7] MA0059 Myc-Max (11) 6.7729 [ 1 -> 8] - [ 4 -> 11] MA0055 Myf (12) 3.3484 [ 3 -> 8] - [ 1 -> 6] MA0060 NF-Y (16) 4.8855 [ 1 -> 6] - [11 -> 16] MA0051 Irf-2 (18) 4.8474 [ 1 -> 7] - [12 -> 18] MA0056 MZF_1-4 ( 6) 4.7448 [ 1 -> 6] - [ 2 -> 7] MOTIF_2 11 MA0057 MZF_5-13 (10) 2.0304 [ 1 -> 8] - [ 4 -> 11] MA0059 Myc-Max (11) 4.8734 [ 1 -> 10] - [ 2 -> 11] MA0055 Myf (12) 2.8825 [ 1 -> 7] - [ 6 -> 12] MA0060 NF-Y (16) 2.7566 [ 1 -> 6] - [11 -> 16] MA0051 Irf-2 (18) 4.3153 [ 1 -> 7] - [12 -> 18] MA0056 MZF_1-4 ( 6) 1.2840 [ 1 -> 6] - [ 6 -> 11] MOTIF_3 12 MA0052 MEF2 (10) 2.7276 [ 1 -> 6] - [ 7 -> 12] MA0059 Myc-Max (11) 4.5235 [ 1 -> 9] - [ 4 -> 12] MA0055 Myf (12) 2.5335 [ 1 -> 6] - [ 7 -> 12] MA0060 NF-Y (16) 2.6437 [ 1 -> 6] - [11 -> 16] MA0051 Irf-2 (18) 2.3476 [ 1 -> 9] - [10 -> 18] MA0056 MZF_1-4 ( 6) 2.5846 [ 1 -> 6] - [ 6 -> 11] MOTIF_4 8 MA0052 MEF2 (10) 1.9148 [ 3 -> 8] - [ 1 -> 6] MA0059 Myc-Max (11) 5.5231 [ 1 -> 8] - [ 1 -> 8] MA0050 Irf-1 (12) 4.0643 [ 1 -> 8] - [ 3 -> 10] MA0060 NF-Y (16) 3.6226 [ 1 -> 8] - [ 7 -> 14] MA0051 Irf-2 (18) 3.5502 [ 1 -> 8] - [10 -> 17] MA0056 MZF_1-4 ( 6) 7.3003 [ 1 -> 6] - [ 1 -> 6] MOTIF_5 8 MA0058 Max (10) 5.4090 [ 3 -> 8] - [ 1 -> 6] MA0059 Myc-Max (11) 5.3027 [ 1 -> 8] - [ 2 -> 9] MA0055 Myf (12) 1.2108 [ 1 -> 8] - [ 2 -> 9] MA0060 NF-Y (16) 4.3234 [ 1 -> 6] - [11 -> 16] MA0051 Irf-2 (18) 3.4877 [ 1 -> 8] - [11 -> 18] MA0056 MZF_1-4 ( 6) 6.9477 [ 1 -> 6] - [ 2 -> 7] MOTIF_6 11 MA0057 MZF_5-13 (10) 2.1326 [ 3 -> 10] - [ 1 -> 8] MA0059 Myc-Max (11) 4.0300 [ 1 -> 7] - [ 5 -> 11] MA0050 Irf-1 (12) 4.4101 [ 1 -> 9] - [ 4 -> 12] MA0060 NF-Y (16) 3.7666 [ 1 -> 9] - [ 8 -> 16] MA0051 Irf-2 (18) 3.7251 [ 1 -> 8] - [11 -> 18] MA0056 MZF_1-4 ( 6) 3.1921 [ 1 -> 6] - [ 2 -> 7] MOTIF_7 11 MA0058 Max (10) 4.2434 [ 1 -> 10] - [ 2 -> 11] MA0059 Myc-Max (11) 4.1828 [ 1 -> 10] - [ 2 -> 11] MA0050 Irf-1 (12) 2.9192 [ 1 -> 8] - [ 5 -> 12] MA0060 NF-Y (16) 2.2264 [ 1 -> 6] - [11 -> 16] MA0051 Irf-2 (18) 3.0357 [ 1 -> 7] - [12 -> 18] MA0056 MZF_1-4 ( 6) 5.4296 [ 1 -> 6] - [ 6 -> 11] MOTIF_8 12 MA0057 MZF_5-13 (10) 3.5788 [ 1 -> 7] - [ 6 -> 12] MA0059 Myc-Max (11) 4.7159 [ 1 -> 9] - [ 4 -> 12] MA0055 Myf (12) 1.9651 [ 1 -> 6] - [ 7 -> 12] MA0060 NF-Y (16) 2.0810 [ 5 -> 12] - [ 1 -> 8] MA0051 Irf-2 (18) 4.5113 [ 1 -> 6] - [13 -> 18] MA0056 MZF_1-4 ( 6) 5.0904 [ 1 -> 6] - [ 6 -> 11] MOTIF_9 12 MA0057 MZF_5-13 (10) 2.2363 [ 1 -> 6] - [ 7 -> 12] MA0059 Myc-Max (11) 4.4858 [ 1 -> 8] - [ 5 -> 12] MA0055 Myf (12) 3.4138 [ 5 -> 12] - [ 1 -> 8] MA0060 NF-Y (16) 2.4943 [ 6 -> 12] - [ 1 -> 7] MA0051 Irf-2 (18) 3.4672 [ 1 -> 7] - [12 -> 18] MA0056 MZF_1-4 ( 6) 1.4763 [ 1 -> 6] - [ 4 -> 9]